Free SKILL.md scraped from GitHub. Clone the repo or copy the file directly into your Claude Code skills directory.
npx versuz@latest install a5c-ai-babysitter-library-specializations-domains-science-bioinformatics-skills-algit clone https://github.com/a5c-ai/babysitter.gitcp babysitter/SKILL.MD ~/.claude/skills/a5c-ai-babysitter-library-specializations-domains-science-bioinformatics-skills-al/SKILL.md---
name: alphafold-predictor
description: AlphaFold protein structure prediction skill with confidence assessment and model analysis
allowed-tools:
- Read
- Write
- Glob
- Grep
- Edit
- WebFetch
- WebSearch
- Bash
metadata:
version: "1.0"
category: bioinformatics
tags:
- structural-biology
- structure-prediction
- alphafold
- protein
---
# AlphaFold Predictor Skill
## Purpose
Enable AlphaFold protein structure prediction with confidence assessment and model analysis.
## Capabilities
- Structure prediction execution
- pLDDT confidence scoring
- PAE analysis
- Multi-chain complex prediction
- Template-based refinement
- ColabFold integration
## Usage Guidelines
- Review pLDDT scores for prediction confidence
- Analyze PAE for domain boundaries
- Predict complexes for multi-protein assemblies
- Use templates when homologs exist
- Validate predictions against experimental data
- Document model versions and parameters
## Dependencies
- AlphaFold2
- ColabFold
- RoseTTAFold
## Process Integration
- Protein Structure Prediction (protein-structure-prediction)
- Molecular Docking and Virtual Screening (molecular-docking)